Affordances And Control Of A Spine Morphology For Robotic Quadrupedal Locomotion

How does a robot\u27s body affect what it can do? This thesis explores the question with respect to a body morphology common to biology but rare in contemporary robotics: the presence of a bendable back. In this document, we introduce the Canid and Inu quadrupedal robots designed to test hypotheses related to the presence of a robotic sagittal-plane bending back (which we refer to as a ``spine morphology\u27\u27). The thesis then describes and quantifies several advantages afforded by this morphological design choice that can be evaluated against its added weight and complexity, and proposes control strategies to both deal with the increase in degrees-of-freedom from the spine morphology and to leverage an increase in agility to reactively navigate irregular terrain. Specifically, we show using the metric of ``specific agility\u27\u27 that a spine can provides a reservoir of elastic energy storage that can be rapidly converted to kinetic energy, that a spine can augment the effective workspace of the legs without diminishing their force generation capability, and that -- in cases of direct-drive or nearly direct-drive leg actuation -- the spine motors can contribute more work in stance than the same actuator weight used in the legs, but can do so without diminishing the platform\u27s proprioceptive capabilities. To put to use the agility provided by a suitably designed robotic platform, we introduce a formalism to approximate a set of transitional navigational tasks over irregular terrain such as leaping over a gap that lend itself to doubly reactive control synthesis. We also directly address the increased complexity introduced by the spine joint with a modular compositional control framework with nice stability properties that begins to offer insight into the role of spines for steady-state running. A central theme to both the reactive navigation and the modular control frameworks is that analytical tractability is achieved by approximating the modes driving the environmental interactions with constant-acceleration dynamics

Towards a Comparative Measure for Legged Agility

We introduce an agility measure enabling the comparison of two very different leaping-from-rest transitions by two comparably powered but morphologically different legged robots. We use the measure to show that a flexible spine outperforms a rigid back in the leaping- from-rest task. The agility measure also sheds light on the source of this benefit: core actuation through a sufficiently powerful parallel elastic actuated spine outperforms a similar power budget applied either only to preload the spine or only to actuate the spine during the leap, as well as a rigid backed configuration of the identical machine

Desert RHex Technical Report: Tengger Desert Trip

Desertification is a long-standing issue in China, but research on the processes of desertification is limited by availability of personnel and technical equipment. This suggests a perfect application and further testing ground for the mobile desert sensing technology described in a previous technical report. We describe here the first of two trips to the Tengger Desert as part of a collaborative effort to bring Desert RHexes to China, with the goal of this trip being to discover and address potential locomotor challenges. Our robots were able to ascend 20-degree slopes with an 8.5kg payload, indicating that they could indeed be used for this novel mobile desert sensor application. We achieved locomotion on up to 30-degree slopes unreliably and on up to 27-degree slopes using morphological and behavioral adaptations inspired by our last desert trip

Free-Standing Leaping Experiments with a Power-Autonomous, Elastic-Spined Quadruped

We document initial experiments with Canid, a freestanding, power-autonomous quadrupedal robot equipped with a parallel actuated elastic spine. Research into robotic bounding and galloping platforms holds scientific and engineering interest because it can both probe biological hypotheses regarding bounding and galloping mammals and also provide the engineering community with a new class of agile, efficient and rapidly-locomoting legged robots. We detail the design features of Canid that promote our goals of agile operation in a relatively cheap, conventionally prototyped, commercial off-the-shelf actuated platform. We introduce new measurement methodology aimed at capturing our robot’s “body energy” during real time operation as a means of quantifying its potential for agile behavior. Finally, we present joint motor, inertial and motion capture data taken from Canid’s initial leaps into highly energetic regimes exhibiting large accelerations that illustrate the use of this measure and suggest its future potential as a platform for developing efficient, stable, hence useful bounding gaits. For more information: Kod*La

The SIB Swiss Institute of Bioinformatics' resources: focus on curated databases

The SIB Swiss Institute of Bioinformatics (www.isb-sib.ch) provides world-class bioinformatics databases, software tools, services and training to the international life science community in academia and industry. These solutions allow life scientists to turn the exponentially growing amount of data into knowledge. Here, we provide an overview of SIB's resources and competence areas, with a strong focus on curated databases and SIB's most popular and widely used resources. In particular, SIB's Bioinformatics resource portal ExPASy features over 150 resources, including UniProtKB/Swiss-Prot, ENZYME, PROSITE, neXtProt, STRING, UniCarbKB, SugarBindDB, SwissRegulon, EPD, arrayMap, Bgee, SWISS-MODEL Repository, OMA, OrthoDB and other databases, which are briefly described in this article

Formal design of a provably safe robotic roundabout system

In this paper, we show how to design a provably safe robotic roundabout system comprised of three vehicles. This is accomplished by combining two-vehicle collision avoidance primitives, which are each computationally light given the natural partial order structure on which the system evolves. We show how to design the system parameters in order to prevent conflicts among the control primitives, and to thus ensure the safety and liveness of the system as a whole. We implement our design on a multi-vehicle test-bed involving three vehicles continuously running on three intersecting roundabouts, and provide experimental results demonstrating the system is collision free and live.National Science Foundation (U.S.) (NSF-CAREER Award CNS-0642719)National Science Foundation (U.S.) (NSF-GOALI Award CMMI-0854907

Distance from Sub-Saharan Africa Predicts Mutational Load in Diverse Human Genomes

The Out-of-Africa (OOA) dispersal ∼50,000 y ago is characterized by a series of founder events as modern humans expanded into multiple continents. Population genetics theory predicts an increase of mutational load in populations undergoing serial founder effects during range expansions. To test this hypothesis, we have sequenced full genomes and high-coverage exomes from seven geographically divergent human populations from Namibia, Congo, Algeria, Pakistan, Cambodia, Siberia, and Mexico. We find that individual genomes vary modestly in the overall number of predicted deleterious alleles. We show via spatially explicit simulations that the observed distribution of deleterious allele frequencies is consistent with the OOA dispersal, particularly under a model where deleterious mutations are recessive. We conclude that there is a strong signal of purifying selection at conserved genomic positions within Africa, but that many predicted deleterious mutations have evolved as if they were neutral during the expansion out of Africa. Under a model where selection is inversely related to dominance, we show that OOA populations are likely to have a higher mutation load due to increased allele frequencies of nearly neutral variants that are recessive or partially recessive